0750 GMT December 03, 2020
The peatbog, which stretches across Caithness and Sutherland, is the largest in Europe and is an import store of greenhouse gases, BBC reported.
The Fire Blanket project will examine the effects of a large blaze which burned for several days in May across an area of about 22 square miles.
Researchers said it offered a ‘unique opportunity’ to fill gaps in knowledge.
They will look at the way vegetation and water quality changed during the fire and afterwards.
The 494,210-acre (200,000ha) expanse of the Flow Country, more than twice the size of Orkney, includes peatbog, lochs and bog pools.
Its unusual nature means it is currently being considered for World Heritage status.
The fire in May spread from the outskirts of Melvich on the north coast to Forsinard in the heart of the Flow Country.
The site being studied has been chosen because it already contains a vast amount of data readings from before the fire.
Comparative readings over the next 12 months will allow the researchers to chart the peatland's recovery.
Roxane Andersen, from the Environmental Research Institute at the University of the Highlands and Islands, said it offered "a unique opportunity to fill important gaps in knowledge required to improve management of peatlands to minimize fire risk and maximize resilience".
What is the Flow Country?
• Bogs in the tundra-like landscape have been growing since the end of the last Ice Age more than 10,000 years ago.
• The area's peat is up to 10 meter (33ft) deep.
• Its soil stores about 100 million tons of carbon.
• People live and work in the Flow Country and its communities include tiny Forsinard.
• Wildlife found in the area include otters, deer and common scoter ducks. In the UK, common scoters breed at only a few locations, including the Flow Country and the lochs and and glens near Inverness.
Peatlands perform an important function by soaking up carbon dioxide from the atmosphere and locking it away.
The small number of plant varieties which can grow in the wet conditions, such as sphagnum moss, do not rot away but form the layers of peat which is continually growing.
The wild habitat also promotes a wealth of biodiversity by encouraging a range of bird, animal and plant species.
Experts said extreme weather events, including wildfires, were likely to increase in frequency as a result of the changing climate.
Andersen, from the University of the Highlands and Islands, said: "Understanding how land-use interacts with climate extremes in peatlands is essential to inform which management practices best maintain and enhance peatland carbon storage.
"However, this is notoriously challenging to achieve because climate extremes are rare and ephemeral. In addition, their effects can only be truly assessed where high-quality, ground-based observations pre-date an extreme event and where data from both impacted and similar control areas can be compared afterwards."
She said all of these conditions had come together in the recent Flow Country fire.
The damaged area is about 10 miles long with the peatland managed in different ways across the area.
Some sections contain tree plantations while others are partially restored.
The study will also look at the impact of the fire on the different styles of land management.